Cell-level competency and evolutionary efficiency
Cell-level competency is the ability of cells to carry out their part of development reliably, even when conditions are imperfect. In simulation, Shreesha and Levin (2023) and Hartl, Risi and Levin (2024) varied this ability and measured how an evolutionary algorithm responded. Their work asks whether competent parts change the speed and success of evolutionary search.57
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- 2012, McGregor S, Vasas V, Husbands…
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- Evolutionary Implications of Self-Assembling…, 2024
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- 107 passages in 17 works
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- 2026-10-28
Evolutionary algorithms as tools
Evolutionary algorithms served as search tools in these works. Lobo and Levin (2015) evolved a population of candidate regulatory networks in parallel until one matched the experimental results with zero error.1 Kriegman, Cheney and Bongard (2018) compared a control called Evo, which kept a fixed morphology and control policy over a robot's lifetime, with a variant that included development.2 They reported an incremental path that selection could climb, as legs grew and controllers were refined together.3 Kriegman and colleagues (2020) fed patterns from deployed organisms back into the algorithm as constraints.4
Competency in embryos
In the work of Shreesha and Levin (2023), each competent embryo was assigned a competency level. This integer set how many bubble-sort swaps the embryo could perform within its developmental cycle.5 They then placed competent embryos among hardwired ones and varied the starting proportion. At 2.5% of the population, competent embryos failed to dominate even at the highest level tested. At 10%, a level of 75 sufficed. At 20% the required level fell to 40, and at 30% a level of 10 was enough.6 Where competent embryos dominated, they did so in two or at most three generations.6
Noise and search efficiency
Hartl, Risi and Levin (2024) used neural cellular automata. They scaled competency continuously, from a direct encoding of the target pattern with no competency to a multi-scale competency architecture.7 Their result depended on noise. With little or no noise, the search was most efficient at low competency, and direct encoding looked preferable.8 With more noise, higher competency gave much greater efficiency. At noise levels of 0.375 and 0.5, the algorithm found no solution for direct encoding within 2000 generations.8
Extension to aging
Pio-Lopez, Hartl and Levin (2025) developed an evolutionary framework with multi-scale competency to study aging. They stated that, as far as they knew, aging literature so far lacked computational models that considered cellular information processing and multi-scale competency.9 Their aim was an evolutionary model that included multi-scale competency in tissue.
We employed an evolutionary algorithm [114] approach to search for regulatory networks, where a population of candidate networks evolve in parallel until a network with zero error is found.
Lobo D, Levin M, 2015 · Inferring regulatory networks from experimental morphological phenotypes: a… · open at passage 51The control treatment, Evo, lacks development and therefore maintains a fixed morphology and control policy in a robot as it behaves over its lifetime.
Kriegman S, Cheney N, Bongard J, 2018 · How morphological development can guide evolution · open at passage 16There is then an incremental path of increasing locomotion speed that natural selection can climb by gradually growing legs to reduce the surface area touching the floor
Kriegman S, Cheney N, Bongard J, 2018 · How morphological development can guide evolution · open at passage 26Common patterns among the successful systems are distilled down into constraints and supplied back to the evolutionary algorithm
Kriegman S, Blackiston D, Levin M, Bongard J, 2020 · A scalable pipeline for designing reconfigurable organisms · open at passage 10This integer determines how many successive bubble-sort swaps will take place during its developmental cycle.
Shreesha L, Levin M, 2023 · Cellular Competency during Development Alters Evolutionary Dynamics in an… · open at passage 17At 10%, embryos with a competency level of 75 could dominate; at 20%, the competency level required for domination decreased to 40; and at 30%, competent embryos dominated with a competency as low as 10
Shreesha L, Levin M, 2023 · Cellular Competency during Development Alters Evolutionary Dynamics in an… · open at passage 24This allows us to continuously scale the NCA competency level from a direct encoding scheme of the target pattern (no competency) to a multi-scale competency architecture
Hartl B, Risi S, Levin M, 2024 · Evolutionary Implications of Self-Assembling Cybernetic Materials with… · open at passage 72for noise levels of ξc=0.375 and 0.5, the EA does not even find solutions for the direct encoding case with PD=0 in 2000 generations
Hartl B, Risi S, Levin M, 2024 · Evolutionary Implications of Self-Assembling Cybernetic Materials with… · open at passage 49so far lacks computational models of aging considering cellular information processing
Pio-Lopez L, Hartl B, Levin M, 2025 · Aging as a Loss of Goal-Directedness: An Evolutionary Simulation and Analysis… · open at passage 94