Bioenergetics  ·  Article

Supercomplex assembly, disassembly and biogenesis

Supercomplex assembly concerns how the respiratory complexes of the inner mitochondrial membrane come to sit together. Sousa and colleagues (2016) relayed a proposal that supercomplexes form from subunits and partial assemblies, not from finished complexes, with the NADH dehydrogenase module of complex I added last23. Their cryo-EM classes lacking that module may show assembly, disassembly or recycling intermediates1.

Earliest held
2016, Sousa JS, Mills DJ, Vonck J…
Most discussed in
Mitochondrial Supercomplexes Do Not Enhance…, 2018
In the library
16 passages in 5 works
Rewritten
2026-11-03
01

Order of assembly

Sousa, Mills, Vonck and Kühlbrandt (2016) discussed a study of respirasome biogenesis by Moreno-Lastres and colleagues (2012). That study suggested that supercomplexes form by association of individual subunits or intermediate assemblies, rather than from fully assembled complexes2. It presented incorporation of the NADH:dehydrogenase module of complex I as the final step3. It also reported a significant delay in integrating the 51 kDa subunit, a core subunit of the N-catalytic unit of complex I3. Sousa and colleagues described these observations as in agreement with their own cryo-EM data on the bovine respirasome3.

02

Intermediates seen by cryo-EM

In the bovine respirasome work, about 30% of the initial dataset fell into classes with no density for the NADH:dehydrogenase module, or without the whole matrix arm. The authors allowed that this might be partial loss during purification or grid preparation. They did not rule out that these are assembly, disassembly or recycling intermediates1. They gave a second reading. Several nuclear-encoded subunits of mature complex I can be exchanged for newly imported copies, alongside de novo assembly4. Most N-catalytic unit subunits are particularly susceptible to oxidative damage, so direct replacement could repair them4. The classes could therefore reflect complex I regeneration4.

03

Modular assembly of other complexes

Protasoni and Zeviani (2021) reviewed assembly of the other respiratory complexes and described it as modular. For ATP synthase, three sub-assemblies form individually and are then put together: the F1 module, the c-ring and the peripheral stalk8. For cytochrome c oxidase, the MTCO1 module forms in parallel with other parts. Its first binding factors are COX14 and COA3, which assist the subunit during and after membrane insertion7.

04

Structures, function and membrane context

Caruana and Stroud (2020) noted a first structure of a complex I assembly intermediate. A homologue of the assembly factor NDUFAF2 was bound to an incomplete complex from cells lacking NDUFS6. The authors of that structure concluded that NDUFAF2 occupies the position later taken by NDUFA12 and blocks NDUFS6 binding6. Fedor and Hirst (2018) tested a possible function of the finished assemblies and found that quinone is not channeled within supercomplexes but acts as a common pool5. Rao and colleagues (2026) reported that cristae collapse impairs supercomplex assembly9.

SourcesEach quotation was checked word for word against the passage it opens.
  1. we cannot rule out the possibility that they represent biologically relevant assembly, disassembly or recycling intermediates of the respirasomeSousa JS, Mills DJ, Vonck J, Kühlbrandt W, 2016 · Functional asymmetry and electron flow in the bovine respirasome · open at passage 17
  2. suggested that supercomplexes form by association of individual subunits of the respiratory complexes or their intermediate assemblies, rather than from the fully assembled respiratory chain complexesSousa JS, Mills DJ, Vonck J, Kühlbrandt W, 2016 · Functional asymmetry and electron flow in the bovine respirasome · open at passage 17
  3. The incorporation of the NADH:dehydrogenase module of complex I has been presented as the final step in the assembly processSousa JS, Mills DJ, Vonck J, Kühlbrandt W, 2016 · Functional asymmetry and electron flow in the bovine respirasome · open at passage 17
  4. It has been shown that several of the nuclear-encoded subunits in the mature enzyme can be exchanged against newly imported copies, in parallel to the de novo assembly of the complexSousa JS, Mills DJ, Vonck J, Kühlbrandt W, 2016 · Functional asymmetry and electron flow in the bovine respirasome · open at passage 18
  5. quinone is not channeled or sequestered by the respiratory-chain supercomplexes: it operates as a common pool, shared between all enzymesFedor JG, Hirst J, 2018 · Mitochondrial Supercomplexes Do Not Enhance Catalysis by Quinone Channeling · open at passage 5
  6. assembly factor NDUFAF2 binds to the position eventually occupied by the subunit NDUFA12, preventing the binding of NDUFS6Caruana NJ, Stroud DA, 2020 · The road to the structure of the mitochondrial respiratory chain supercomplex · open at passage 12
  7. The first factors binding MTCO1 are COX14/C12ORF62 and COA3/CCDC56/MITRAC12Protasoni M, Zeviani M, 2021 · Mitochondrial Structure and Bioenergetics in Normal and Disease Conditions · open at passage 82
  8. the CV assembly is also modular. Three sub-assemblies are formed individually and then put together: the F1 module, the c-ring and the peripheral stalkProtasoni M, Zeviani M, 2021 · Mitochondrial Structure and Bioenergetics in Normal and Disease Conditions · open at passage 88
  9. cristae collapse that impairs respiratory supercomplex assembly and exacerbates ROS productionRao J, Wan QQ, Chen L, Tang RB, Killedar D, Tay F, Niu LN, 2026 · Cristae: bridging bioenergetic hubs and compartmental barriers in mitochondrial… · open at passage 46
Linked ideas
Complex I assembly, including the NADH dehydrogenase module and its late addition, is the main case discussed here.
The classes lacking the N module come from cryo-EM work on the respirasome.
Fedor and Hirst found a shared quinone pool, which bears on what assembled supercomplexes are for.
Cristae collapse is reported to impair supercomplex assembly.
ATP synthase also assembles from separately formed modules.
Oxidative damage to N-module subunits and ROS from partial complexes both tie assembly to reactive oxygen.
Oxidative phosphorylationpart of / contains
B concerns how respiratory complexes assemble into supercomplexes like the CI:CIII2:CIV respirasome, which carries out respiration (A); debate persists on whether supercomplexes enhance catalysis, stabilize CI, or reduce ROS.
Complex I is a building block of supercomplexes (CI:CIII2:CIV respirasome). Passages cover a Complex I assembly intermediate with NDUFAF2 and proposals that supercomplexes stabilise Complex I or aid its assembly.
Where it is discussedPassages matching respirasome biogenesis, supercomplex assembly, assembly intermediates, disassembly or recycling intermediates
2018Mitochondrial Supercomplexes Do Not Enhance Catalysis by Quinone Channeling · Fedor JG, Hirst J6
2021Mitochondrial Structure and Bioenergetics in Normal and Disease Conditions · Protasoni M, Zeviani M4
2016Functional asymmetry and electron flow in the bovine respirasome · Sousa JS, Mills DJ, Vonck J, Kühlbrandt…3
2020The road to the structure of the mitochondrial respiratory chain supercomplex · Caruana NJ, Stroud DA2
2026Cristae: bridging bioenergetic hubs and compartmental barriers in mitochondrial… · Rao J, Wan QQ, Chen L, Tang RB…1